At Mendeley Data, the open research data repository, we’ve just launched folders to help every dataset author group and logically organise their research data files into folders, in the same way they would organise files on their computer. Created 06/12/2019 01.31 PM Edited 25/03/2020 03.50 PM. Individual SDOCT images and marking: 38400 BScans from 269 AMD patients and 115 normal subjects, their ages, and their corresponding segmentation boundaries on a 5mm diameter centered at the fovea. For example, I would… Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. Datasets in Mendeley Data are viewed and downloaded frequently – on average once per month. A dataset is a collection of research data files, alongside some metadata about the dataset itself. Datasets can be shared privately amongst individuals, as well as published to share with the world. We’re extremely happy with all the great datasets people have been submitting, and we now think that the product has reached the level of maturity where it has all the features people need to publish their research data online. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. Please reference the paper if you would like to use any part of this method or datasets. 1. For Institutions: Ability to moderate datasets prior to go-live, so that data curators can maintain dataset quality. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. As Zotero lacks an "item type" for datasets, enter the citation in the system as a "Document," depending upon if/how the data producer provides a recommended citation; either: Export an RIS file and import this file into Zotero; Copy and paste the information from a recommended citation into a new Zotero item with the type "Document" Help us to improve Mendeley Data by telling us what we can do better. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. In turn, researchers benefit with time savings when searching, collecting, and sharing data by using the Mendeley Data datasets and SSRN tools to disseminate their early-stage discoveries. This dataset contains thousands of validated OCT and Chest X-Ray images described and analyzed in "Identifying Medical Diagnoses and Treatable Diseases by Image-Based Deep Learning". How to cite this data: By using Mendeley Data you can Search 24.4 million datasets from domain-specific and cross-domain repositories. Cell. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. Elsevier's data and code for the bioCADDIE 2016 Dataset Retrieval Challenge. You can import your own folder structure, and your data is automatically tagged with subject classifications. As of August 2019, Mendeley Careers offered 295k science and technology job opportunities. However, there is no clear way to cite the dataset correctly using Mendeley. Identifying Medical Diagnoses and Treatable Diseases by Image-Based Deep Learning. … Verify on OCT dataset. A validation set http://dx.doi.org/10.1016/j.cell.2018.02.010. A collection of datasets published on Mendeley Data that recognize researchers or research groups who make their research data available for additional research and do so in a way that exemplifies the FAIR data principles – Findable, Accessible, Interoperable, Reusable. We have made available the world's largest online annotated SD-OCT dataset from 384 intermediate AMD and control subjects utilized in the following paper . Mendeley Data Repository is free-to-use and open access. This dataset is assembled in easy to use MATLAB format and is over 20GB in size and is broken into the following compartments. See below for details on how it works. As a result, we see that articles having accompanying datasets get cited more often. Copyright © 2021 Mendeley Ltd. All rights reserved. To focus on providing the best possible service and experience for the users of these tools, we will simplify Mendeley and retire the following features from December 2020: Cotroneo, P. (Creator), Mendeley Data, 2017 DOI: 10.17632/zd9dxpyybg.1. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. Approximately 30 million OCT scans are performed each year, and the analysis and interpretation of these images takes up a significant amount of time (Swanson and Fujimoto, 2017). To check if the findings can be used on other datasets, some experiments conducted on the OCT dataset which was published together with the Pneumonia dataset but included 108,309 OCT images. "Quantitative Classification of Eyes with and without Intermediate Age-related Macular Degeneration Using Optical Coherence Tomography", Ophthalmology, 121(1), 162-172 Jan. (2014). Copyright © 2021 Mendeley Ltd. All rights reserved. There’s compliance with funders’ mandates and improved impact to increase data reuse. Mendeley Data Repository. Approximately 30 million OCT scans are performed each year, and the analysis and interpretation of these images takes up a significant amount of time (Swanson and Fujimoto, 2017). The event will bring together researchers and practitioners from across industry, government, digital libraries and academia to address the latest challenges in the field of mining data from scientific publications. A dataset is a collection of research data files, alongside some metadata about the dataset itself. See below for details on how it works. Mendeley Data is an open research data repository, where researchers can upload and share their research data. Mendeley Data for Institutions. Datasets published on Mendeley Data are available through the Datasets API. Be sure to download the most recent version of this dataset to maintain accuracy. A. Dataset Mendeley dataset [23]: It has total 84495 OCT images with 3 diseases and 1 normal class.To train the model 75K of these images were used. You can create and edit a private draft dataset, but once published, it becomes a permanent unchanging public record. Folgar, E. Yuan, J.A. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. The OCT Images are split into a training set and a testing set of independent patients. Dataset of validated OCT and Chest X-Ray images described and analyzed in "Deep learning-based classification and referral of treatable human diseases". The OCT Images are split into a training set and a testing set of independent patients. Retinal optical coherence tomography (OCT) is an imaging technique used to capture high-resolution cross sections of the retinas of living patients. Mendeley Data Repository is free-to-use and open access. In April 2016, Mendeley Data, a platform for sharing citable research datasets online, was promoted out of beta. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. The images are split into a training set and a testing set of independent patients. Store your data in Mendeley Data. Remove Rating Be the first to vote Report . Mendeley Data is a secure cloud-based repository where you can store your data, ensuring it is easy to share, cite and download free datasets, wherever you are. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. Mendeley Data is a secure cloud-based repository where you can store your data, ensuring it is easy to share, access and cite, wherever you are. Datasets published on Mendeley Data are available through the Datasets API. Benefits of sharing research data include complying with funder mandates, enabling reuse by other researchers, and increasing the reproducibility, transparency and trust of the original research. OCT Images are labeled as (disease)- (randomized patient ID)- (image number by this patient) and split into 4 directories: CNV, DME, DRUSEN, and NORMAL. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. This repository of images is made available for use in research only. Several studies indicated how dietary patterns that were obtained from nutritional cluster analysis can predict disease risk or mortality. Mendeley Data Repository is free-to-use and open access. Starting today, Mendeley Data is out of beta. Download All (6704 MB) This dataset contains thousands of validated OCT and Chest X-Ray images described and analyzed in "Identifying Medical Diagnoses and Treatable Diseases by Image-Based Deep Learning". “It would be great if a … Help us to improve Mendeley Data by telling us what we can do better. Mendeley is supporting the 3 rd edition of the International Workshop on Mining Scientific Publications, which will take place on the 12 th September 2014 in London. Mendeley Data has expanded coverage to more than 25 million datasets over 2000 data repositories, making researcher data even more findable and citable. Download Mendeley Desktop for Windows Windows 7, 8.1 and 10 (Version 1803) See release notes. A validation set As Zotero lacks an "item type" for datasets, enter the citation in the system as a "Document," depending upon if/how the data producer provides a recommended citation; either: Export an RIS file and import this file into Zotero; Copy and paste the information from a recommended citation into a new Zotero item with the type "Document" Kermany D, Goldbaum M, Cai W et al. Mendeley Data offers the option to publish and share your supporting data files, which is often required by journals and funding agencies. Extensive data augmentation techniques with more than 230 convolutional layers were used to train the deep model for CNV, DME, DRUSEN and Normal OCT image classification. Mendeley Data is an ope n, free-to-use research data repository, which enables researchers to make their research data publicly available. Figure 2. Mendeley Data offers modular research data management and collaboration solutions for your university, offering a range of institutional packages which can be tailored to best suit your research data requirements. This dataset contains thousands of validated OCT and Chest X-Ray images described and analyzed in "Identifying Medical Diagnoses and Treatable Diseases by Image-Based Deep Learning". S. Farsiu, SJ. (2019) Tuttolomondo et al. An open science repository, Mendeley Data allows you to quickly and easily upload files of any type – with as many as 10GB per dataset. Mendeley Data Repository is free-to-use and open access. It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. Mendeley Data Repository is free-to-use and open access. The images are split into a training set and a testing set of independent patients. If you haven’t heard of Mendeley Data before,… University of California San Diego, Guangzhou Women and Children's Medical Center, Applied Sciences, Medicine, Ophthalmology, Retina, Deep Learning. A. Dataset Mendeley dataset [23]: It has total 84495 OCT images with 3 diseases and 1 normal class.To train the model 75K of these images were used. Mendeley Data Repository is free-to-use and open access. Images are labeled as (disease)-(randomized patient ID)-(image number by this patient) and split into 4 directories: CNV, DME, DRUSEN, and NORMAL. In October 2016, Mendeley Careers was launched to help researchers to locate job opportunities. O’Connell, F.A. Mendeley Data Repository is free-to-use and open access. International Journal of Molecular Sciences. Trish Wilgar October 20, 2020 Did You Know. Download Mendeley Desktop for Windows Windows 7, 8.1 and 10 (Version 1803) See release notes. From Table 12, it can be seen, the best result obtained from test 5. Mendeley Data offers the option to publish and share your supporting data files, which is often required by journals and funding agencies. Toth "Quantitative Classification of Eyes with and without Intermediate Age-related Macular Degeneration Using Optical Coherence Tomography", Other systems: Mendeley Desktop for macOS Mendeley Desktop for Linux Delegated institutional moderators are now able to review each dataset associated to the institution when it’s submitted for publishing, and either approve the dataset to go live, or return to the author with feedback. OCT Images are labeled as (disease)-(randomized patient ID)-(image number by this patient) and split into 4 directories: CNV, DME, DRUSEN, and NORMAL. Browse datasets List of features. Make your research data citable. Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. Figure 2. Other systems: Mendeley Desktop for macOS Mendeley Desktop for Linux Extensive data augmentation techniques with more than 230 convolutional layers were used to train the deep model for CNV, DME, DRUSEN and Normal OCT image classification. Figure 2 The binding energies of the TM solute with an oxygen atom in their {\rm Oct}_{1nn} and {\rm Tet}_{1nn} to {\rm Tet}_{7nn} sites as displayed in Fig. Mendeley Data is pleased to announce that we’ve adopted the new Google Science Datasets markup standard for datasets. The new Mendeley Reference Manager has been built using researchers’ feedback to give you what you need to manage your references even more quickly and effectively. I tried de 'Webpage'-option, but it does not seem to do the job. Upvote. “It would be great if a folder structure would be applicable for datasets. You can create and edit a private draft dataset, but once published, it becomes a permanent unchanging public record. New Reference Manager Store all your references in one place Your datasets will also be searchable on Mendeley Data Search, which includes nearly 11 million indexed datasets. Share and discover datasets Mendeley Data is a secure cloud-based repository where you can store your data, ensuring it is easy to share, access and cite, wherever you are. Mendeley Data Repository is free-to-use and open access. Dataset Thank you in advance! It enables you to deposit any research data (including raw and processed data, video, code, software, algorithms, protocols, and methods) associated with your research manuscript. Unique DOIs and easy-to … Datasets in this collection have been selected by Elsevier's independent Research Data Management Advisory Board. Retinal optical coherence tomography (OCT) is an imaging technique used to capture high-resolution cross sections of the retinas of living patients. For the non-computer science buffs amongst us, this means we describe our datasets in a structured way recognised by Google - which helps Google to index our datasets, and makes them more readily available in their search results.… Chiu, R.V. @INPROCEEDINGS{8593514, author={M. {Carpentier} and P. {Giguère} and J. At Mendeley Data, the open research data repository, we've just launched folders to help every dataset author group and logically organise their research data files into folders, in the same way they would organise files on their computer. 2018; 172(5):1122-1131. doi:10.1016/j.cell.2018.02.010. Mendeley Data is a secure cloud-based repository where you can store your data, ensuring it is easy to share, access and cite, wherever you are. Izatt, and C.A. The images are split into a training set and a testing set of independent patients. Broken into the following paper individuals, as well as published to share with the world into... 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